Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SRGAP2CP0DJJ0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRGAP2CP0DJJ0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.61■□□□□ 0.73
SRGAP2CP0DJJ0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRGAP2CP0DJJ0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 FAM220CP-201ENST00000395253 831 ntBASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 MRPL3P1-201ENST00000400109 1033 ntBASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRGAP2CP0DJJ0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 TP73-AS1-207ENST00000624167 988 ntBASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRGAP2CP0DJJ0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRGAP2CP0DJJ0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 ABCD1P5-201ENST00000445663 754 ntBASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 FAM197Y8-203ENST00000450145 560 ntBASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.58■□□□□ 0.72
SRGAP2CP0DJJ0 AL355877.3-201ENST00000622820 899 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms