Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.05■□□□□ 0.8
TPM3P06753 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.05■□□□□ 0.8
TPM3P06753 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TPM3P06753 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.05■□□□□ 0.8
TPM3P06753 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.05■□□□□ 0.8
TPM3P06753 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
TPM3P06753 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TPM3P06753 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TPM3P06753 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
TPM3P06753 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TPM3P06753 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM3P06753 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.04■□□□□ 0.8
TPM3P06753 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 AC009065.1-201ENST00000564055 1225 ntBASIC20.04■□□□□ 0.8
TPM3P06753 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.04■□□□□ 0.8
TPM3P06753 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
TPM3P06753 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.04■□□□□ 0.8
TPM3P06753 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 AL162727.3-201ENST00000635661 2787 ntBASIC20.04■□□□□ 0.8
TPM3P06753 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.04■□□□□ 0.8
TPM3P06753 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TPM3P06753 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 AC105020.1-201ENST00000435356 2205 ntBASIC20.03■□□□□ 0.8
TPM3P06753 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 ESRRAP1-201ENST00000400596 1257 ntBASIC20.03■□□□□ 0.8
TPM3P06753 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.03■□□□□ 0.8
TPM3P06753 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 AC096733.2-201ENST00000609937 1394 ntBASIC20.03■□□□□ 0.8
TPM3P06753 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.03■□□□□ 0.8
TPM3P06753 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TPM3P06753 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.03■□□□□ 0.8
TPM3P06753 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.02■□□□□ 0.8
TPM3P06753 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.02■□□□□ 0.8
TPM3P06753 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TPM3P06753 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.02■□□□□ 0.8
TPM3P06753 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.02■□□□□ 0.8
TPM3P06753 AF186192.3-201ENST00000583427 947 ntBASIC20.02■□□□□ 0.8
TPM3P06753 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms