Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.3■■□□□ 1.32
COL5A2P05997 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.3■■□□□ 1.32
COL5A2P05997 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 AC006116.8-202ENST00000587620 1550 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.29■■□□□ 1.32
COL5A2P05997 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 AL031598.1-201ENST00000561511 1773 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC23.29■■□□□ 1.32
COL5A2P05997 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC23.29■■□□□ 1.32
COL5A2P05997 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.29■■□□□ 1.32
COL5A2P05997 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.29■■□□□ 1.32
COL5A2P05997 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.29■■□□□ 1.32
COL5A2P05997 CXCL1P1-201ENST00000502804 216 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 AC004449.1-201ENST00000564240 433 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC23.29■■□□□ 1.32
COL5A2P05997 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC23.29■■□□□ 1.32
COL5A2P05997 REXO1L3P-201ENST00000622202 1288 ntBASIC23.29■■□□□ 1.32
COL5A2P05997 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC23.29■■□□□ 1.32
COL5A2P05997 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL5A2P05997 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL5A2P05997 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
COL5A2P05997 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.28■■□□□ 1.32
COL5A2P05997 AL121761.2-201ENST00000598007 1648 ntBASIC23.28■■□□□ 1.32
COL5A2P05997 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
COL5A2P05997 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.28■■□□□ 1.32
COL5A2P05997 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL5A2P05997 AC100803.2-201ENST00000562459 1963 ntBASIC23.28■■□□□ 1.32
COL5A2P05997 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.28■■□□□ 1.32
COL5A2P05997 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.28■■□□□ 1.32
COL5A2P05997 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL5A2P05997 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.28■■□□□ 1.32
COL5A2P05997 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.28■■□□□ 1.32
COL5A2P05997 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
COL5A2P05997 DAD1-205ENST00000543337 501 ntTSL 3 BASIC23.28■■□□□ 1.32
COL5A2P05997 AC093520.2-201ENST00000561830 333 ntBASIC23.28■■□□□ 1.32
COL5A2P05997 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC23.28■■□□□ 1.32
COL5A2P05997 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.28■■□□□ 1.32
COL5A2P05997 AC015911.4-201ENST00000588022 1070 ntBASIC23.28■■□□□ 1.32
COL5A2P05997 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.28■■□□□ 1.32
COL5A2P05997 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL5A2P05997 AC116562.4-201ENST00000641316 2276 ntBASIC23.28■■□□□ 1.32
COL5A2P05997 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL5A2P05997 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL5A2P05997 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
COL5A2P05997 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL5A2P05997 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 REM2-202ENST00000536884 1331 ntTSL 2 BASIC23.27■■□□□ 1.32
COL5A2P05997 HARS-201ENST00000307633 1780 ntTSL 2 BASIC23.27■■□□□ 1.32
COL5A2P05997 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
COL5A2P05997 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL5A2P05997 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.27■■□□□ 1.32
COL5A2P05997 DDT-204ENST00000404092 805 ntTSL 3 BASIC23.27■■□□□ 1.32
COL5A2P05997 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
COL5A2P05997 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.27■■□□□ 1.32
COL5A2P05997 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.27■■□□□ 1.32
COL5A2P05997 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.27■■□□□ 1.32
COL5A2P05997 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.27■■□□□ 1.32
COL5A2P05997 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL5A2P05997 INO80C-206ENST00000586489 594 ntTSL 3 BASIC23.27■■□□□ 1.32
COL5A2P05997 LINC00628-201ENST00000628516 1289 ntBASIC23.27■■□□□ 1.32
COL5A2P05997 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL5A2P05997 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL5A2P05997 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.27■■□□□ 1.32
COL5A2P05997 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.27■■□□□ 1.32
COL5A2P05997 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
COL5A2P05997 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
COL5A2P05997 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.26■■□□□ 1.31
COL5A2P05997 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.26■■□□□ 1.31
COL5A2P05997 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
COL5A2P05997 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.26■■□□□ 1.31
COL5A2P05997 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.26■■□□□ 1.31
COL5A2P05997 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.26■■□□□ 1.31
COL5A2P05997 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.26■■□□□ 1.31
COL5A2P05997 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.26■■□□□ 1.31
COL5A2P05997 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL5A2P05997 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms