Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 AC055876.3-201ENST00000431496 288 ntBASIC20.23■□□□□ 0.83
ALDH1A1P00352 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 AL161938.1-201ENST00000569833 2180 ntBASIC20.23■□□□□ 0.83
ALDH1A1P00352 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALDH1A1P00352 AC138649.4-201ENST00000612222 287 ntBASIC20.23■□□□□ 0.83
ALDH1A1P00352 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ALDH1A1P00352 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 AC236430.1-201ENST00000402231 743 ntBASIC20.22■□□□□ 0.83
ALDH1A1P00352 AC002472.2-201ENST00000442739 958 ntBASIC20.22■□□□□ 0.83
ALDH1A1P00352 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
ALDH1A1P00352 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALDH1A1P00352 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 FAM86C2P-203ENST00000528684 1004 ntBASIC20.21■□□□□ 0.83
ALDH1A1P00352 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.21■□□□□ 0.83
ALDH1A1P00352 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 AC018445.3-201ENST00000624177 1945 ntBASIC20.21■□□□□ 0.83
ALDH1A1P00352 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
ALDH1A1P00352 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALDH1A1P00352 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 TSPY16P-201ENST00000449843 468 ntBASIC20.2■□□□□ 0.82
ALDH1A1P00352 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.2■□□□□ 0.82
ALDH1A1P00352 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AC026120.1-201ENST00000611536 926 ntBASIC20.2■□□□□ 0.82
ALDH1A1P00352 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AC097637.2-201ENST00000624096 1997 ntBASIC20.2■□□□□ 0.82
ALDH1A1P00352 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ALDH1A1P00352 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.2■□□□□ 0.82
ALDH1A1P00352 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms