Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 TPI1-206ENST00000488464 791 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 USB1-203ENST00000539737 1212 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC7.89□□□□□ -1.15
USH2AO75445 SSH2-211ENST00000590153 570 ntTSL 4 BASIC7.89□□□□□ -1.15
USH2AO75445 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC7.89□□□□□ -1.15
USH2AO75445 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USH2AO75445 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 PTCHD3P3-201ENST00000403073 906 ntBASIC7.89□□□□□ -1.15
USH2AO75445 API5-211ENST00000534695 560 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
USH2AO75445 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 TSFM-210ENST00000550559 897 ntTSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 AC026150.2-201ENST00000564693 1156 ntBASIC7.89□□□□□ -1.15
USH2AO75445 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 COX11-210ENST00000639671 696 ntBASIC7.89□□□□□ -1.15
USH2AO75445 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
USH2AO75445 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC7.89□□□□□ -1.15
USH2AO75445 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 FAM8A2P-201ENST00000528813 1142 ntBASIC7.89□□□□□ -1.15
USH2AO75445 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC7.89□□□□□ -1.15
USH2AO75445 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 AC092552.1-201ENST00000547243 906 ntBASIC7.89□□□□□ -1.15
USH2AO75445 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC7.89□□□□□ -1.15
USH2AO75445 CYB561-216ENST00000582297 897 ntTSL 3 BASIC7.89□□□□□ -1.15
USH2AO75445 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
USH2AO75445 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 PTPA-220ENST00000436883 532 ntTSL 4 BASIC7.88□□□□□ -1.15
USH2AO75445 RBPMS2P1-201ENST00000437762 623 ntBASIC7.88□□□□□ -1.15
USH2AO75445 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 AC009407.1-201ENST00000568958 598 ntBASIC7.88□□□□□ -1.15
USH2AO75445 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 AL355306.1-201ENST00000415580 579 ntBASIC7.88□□□□□ -1.15
USH2AO75445 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC7.88□□□□□ -1.15
USH2AO75445 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC7.88□□□□□ -1.15
USH2AO75445 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 RPF1-202ENST00000370656 724 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 AL512384.1-201ENST00000406683 331 ntBASIC7.88□□□□□ -1.15
USH2AO75445 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC7.88□□□□□ -1.15
USH2AO75445 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC7.88□□□□□ -1.15
USH2AO75445 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 AFG3L1P-217ENST00000557444 2447 ntBASIC7.88□□□□□ -1.15
USH2AO75445 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
USH2AO75445 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC7.88□□□□□ -1.15
USH2AO75445 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USH2AO75445 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC7.88□□□□□ -1.15
USH2AO75445 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USH2AO75445 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms