Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RNF13O43567 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF13O43567 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.28■□□□□ 0.2
RNF13O43567 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.28■□□□□ 0.2
RNF13O43567 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 PVRIG2P-201ENST00000435460 978 ntBASIC16.28■□□□□ 0.2
RNF13O43567 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 COX11P1-201ENST00000489116 835 ntBASIC16.28■□□□□ 0.2
RNF13O43567 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.28■□□□□ 0.2
RNF13O43567 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.28■□□□□ 0.2
RNF13O43567 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RNF13O43567 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF13O43567 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF13O43567 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 AC113347.1-201ENST00000413321 391 ntBASIC16.27■□□□□ 0.2
RNF13O43567 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.27■□□□□ 0.2
RNF13O43567 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.27■□□□□ 0.2
RNF13O43567 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RNF13O43567 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.27■□□□□ 0.2
RNF13O43567 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RNF13O43567 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RNF13O43567 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
RNF13O43567 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 PP12613-201ENST00000424958 2230 ntBASIC16.27■□□□□ 0.19
RNF13O43567 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RNF13O43567 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF13O43567 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF13O43567 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RNF13O43567 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.27■□□□□ 0.19
RNF13O43567 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RNF13O43567 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RNF13O43567 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RNF13O43567 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
RNF13O43567 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RNF13O43567 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RNF13O43567 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RNF13O43567 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF13O43567 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
RNF13O43567 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RNF13O43567 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
RNF13O43567 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.26■□□□□ 0.19
RNF13O43567 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.26■□□□□ 0.19
RNF13O43567 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.26■□□□□ 0.19
RNF13O43567 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.26■□□□□ 0.19
RNF13O43567 AC097493.4-201ENST00000641197 219 ntBASIC16.26■□□□□ 0.19
RNF13O43567 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RNF13O43567 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RNF13O43567 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.26■□□□□ 0.19
RNF13O43567 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms