Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 PKD1P1-201ENST00000458669 6805 ntBASIC17.11■□□□□ 0.33
NDUFS4O43181 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 RN7SL606P-201ENST00000472779 293 ntBASIC17.11■□□□□ 0.33
NDUFS4O43181 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.11■□□□□ 0.33
NDUFS4O43181 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NDUFS4O43181 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
NDUFS4O43181 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NDUFS4O43181 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS4O43181 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS4O43181 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.1■□□□□ 0.33
NDUFS4O43181 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NDUFS4O43181 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS4O43181 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.1■□□□□ 0.33
NDUFS4O43181 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.1■□□□□ 0.33
NDUFS4O43181 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NDUFS4O43181 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 AC011840.4-201ENST00000578471 627 ntBASIC17.1■□□□□ 0.33
NDUFS4O43181 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS4O43181 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.1■□□□□ 0.33
NDUFS4O43181 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 AC134043.2-201ENST00000624206 2238 ntBASIC17.1■□□□□ 0.33
NDUFS4O43181 AC012317.2-201ENST00000623305 2251 ntBASIC17.1■□□□□ 0.33
NDUFS4O43181 AC067852.2-201ENST00000590513 2313 ntBASIC17.1■□□□□ 0.33
NDUFS4O43181 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NDUFS4O43181 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NDUFS4O43181 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
NDUFS4O43181 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDUFS4O43181 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFS4O43181 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.09■□□□□ 0.33
NDUFS4O43181 AP002383.4-201ENST00000442518 975 ntBASIC17.09■□□□□ 0.33
NDUFS4O43181 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFS4O43181 VENTXP7-201ENST00000475503 772 ntBASIC17.09■□□□□ 0.33
NDUFS4O43181 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFS4O43181 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.09■□□□□ 0.33
NDUFS4O43181 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 AC092119.3-201ENST00000612618 583 ntBASIC17.09■□□□□ 0.33
NDUFS4O43181 KRT8P47-201ENST00000604727 1398 ntBASIC17.09■□□□□ 0.33
NDUFS4O43181 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 AC006116.8-202ENST00000587620 1550 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms