Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.19■□□□□ 0.66
TNRC18O15417 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.19■□□□□ 0.66
TNRC18O15417 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.19■□□□□ 0.66
TNRC18O15417 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNRC18O15417 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TNRC18O15417 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.19■□□□□ 0.66
TNRC18O15417 AC009407.1-201ENST00000568958 598 ntBASIC19.19■□□□□ 0.66
TNRC18O15417 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.19■□□□□ 0.66
TNRC18O15417 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.19■□□□□ 0.66
TNRC18O15417 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.19■□□□□ 0.66
TNRC18O15417 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.19■□□□□ 0.66
TNRC18O15417 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.18■□□□□ 0.66
TNRC18O15417 MIR6080-201ENST00000617359 66 ntBASIC19.18■□□□□ 0.66
TNRC18O15417 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.18■□□□□ 0.66
TNRC18O15417 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 AC073314.1-201ENST00000568729 2216 ntBASIC19.18■□□□□ 0.66
TNRC18O15417 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.18■□□□□ 0.66
TNRC18O15417 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
TNRC18O15417 GOLGA2P4-201ENST00000441462 777 ntBASIC19.18■□□□□ 0.66
TNRC18O15417 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.18■□□□□ 0.66
TNRC18O15417 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNRC18O15417 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNRC18O15417 AC026310.3-201ENST00000625186 2373 ntBASIC19.18■□□□□ 0.66
TNRC18O15417 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 AC098614.1-201ENST00000368528 745 ntBASIC19.17■□□□□ 0.66
TNRC18O15417 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TNRC18O15417 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.17■□□□□ 0.66
TNRC18O15417 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.17■□□□□ 0.66
TNRC18O15417 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TNRC18O15417 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNRC18O15417 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 MIR1908-201ENST00000410394 80 ntBASIC19.17■□□□□ 0.66
TNRC18O15417 TTTY23B-201ENST00000442790 549 ntBASIC19.17■□□□□ 0.66
TNRC18O15417 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.17■□□□□ 0.66
TNRC18O15417 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.17■□□□□ 0.66
TNRC18O15417 AL049757.1-201ENST00000616842 1596 ntBASIC19.16■□□□□ 0.66
TNRC18O15417 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNRC18O15417 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
TNRC18O15417 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.16■□□□□ 0.66
TNRC18O15417 IRX1P1-201ENST00000438849 1838 ntBASIC19.16■□□□□ 0.66
TNRC18O15417 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TNRC18O15417 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.16■□□□□ 0.66
TNRC18O15417 AC008735.3-201ENST00000596646 500 ntBASIC19.16■□□□□ 0.66
TNRC18O15417 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 EP400NL-214ENST00000641289 2402 ntBASIC19.16■□□□□ 0.66
TNRC18O15417 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
TNRC18O15417 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
TNRC18O15417 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.16■□□□□ 0.66
TNRC18O15417 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TNRC18O15417 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNRC18O15417 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.16■□□□□ 0.66
TNRC18O15417 AL021578.1-201ENST00000613646 709 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms