Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
CHD1O14646 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHD1O14646 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
CHD1O14646 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC28.61■■■□□ 2.17
CHD1O14646 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC28.6■■■□□ 2.17
CHD1O14646 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC28.6■■■□□ 2.17
CHD1O14646 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 MIR6080-201ENST00000617359 66 ntBASIC28.6■■■□□ 2.17
CHD1O14646 IGHV3-72-202ENST00000621503 303 ntBASIC28.6■■■□□ 2.17
CHD1O14646 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC28.6■■■□□ 2.17
CHD1O14646 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC28.6■■■□□ 2.17
CHD1O14646 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 AC097637.2-201ENST00000624096 1997 ntBASIC28.6■■■□□ 2.17
CHD1O14646 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC28.6■■■□□ 2.17
CHD1O14646 COX5BP2-201ENST00000392354 334 ntBASIC28.6■■■□□ 2.17
CHD1O14646 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC28.6■■■□□ 2.17
CHD1O14646 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CHD1O14646 CU639417.3-201ENST00000624240 1404 ntBASIC28.6■■■□□ 2.17
CHD1O14646 AC005082.1-201ENST00000413042 2259 ntBASIC28.59■■■□□ 2.17
CHD1O14646 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC28.59■■■□□ 2.17
CHD1O14646 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC28.59■■■□□ 2.17
CHD1O14646 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC28.59■■■□□ 2.17
CHD1O14646 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 ACTG1P4-201ENST00000425123 1122 ntBASIC28.59■■■□□ 2.17
CHD1O14646 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC28.59■■■□□ 2.17
CHD1O14646 AC087163.2-201ENST00000457299 853 ntBASIC28.59■■■□□ 2.17
CHD1O14646 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
CHD1O14646 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC28.59■■■□□ 2.17
CHD1O14646 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC28.59■■■□□ 2.17
CHD1O14646 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CHD1O14646 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
CHD1O14646 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC28.58■■■□□ 2.17
CHD1O14646 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHD1O14646 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
CHD1O14646 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC28.58■■■□□ 2.17
CHD1O14646 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
CHD1O14646 AC097493.3-201ENST00000509725 367 ntBASIC28.58■■■□□ 2.17
CHD1O14646 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC28.58■■■□□ 2.17
CHD1O14646 RARRES2P8-201ENST00000566335 367 ntBASIC28.58■■■□□ 2.17
CHD1O14646 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC28.58■■■□□ 2.17
CHD1O14646 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC28.58■■■□□ 2.17
CHD1O14646 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHD1O14646 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CHD1O14646 AC093010.1-201ENST00000473625 1624 ntBASIC28.58■■■□□ 2.17
CHD1O14646 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD1O14646 LINC00982-205ENST00000420957 435 ntBASIC28.57■■■□□ 2.16
CHD1O14646 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 TMPRSS11CP-201ENST00000453277 683 ntBASIC28.57■■■□□ 2.16
CHD1O14646 GPR53P-205ENST00000457298 1084 ntBASIC28.57■■■□□ 2.16
CHD1O14646 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC28.57■■■□□ 2.16
CHD1O14646 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.57■■■□□ 2.16
CHD1O14646 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC28.57■■■□□ 2.16
CHD1O14646 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
CHD1O14646 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
CHD1O14646 PGF-202ENST00000405431 666 ntTSL 5 BASIC28.57■■■□□ 2.16
CHD1O14646 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 MIR1909-201ENST00000411312 80 ntBASIC28.57■■■□□ 2.16
CHD1O14646 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
CHD1O14646 FAM86C2P-203ENST00000528684 1004 ntBASIC28.57■■■□□ 2.16
CHD1O14646 AC026150.2-201ENST00000564693 1156 ntBASIC28.57■■■□□ 2.16
CHD1O14646 AC109462.3-201ENST00000573934 613 ntBASIC28.57■■■□□ 2.16
CHD1O14646 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CHD1O14646 GNAS-203ENST00000306120 1878 ntBASIC28.56■■■□□ 2.16
CHD1O14646 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC28.56■■■□□ 2.16
CHD1O14646 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHD1O14646 AC079776.1-201ENST00000401540 1152 ntBASIC28.56■■■□□ 2.16
CHD1O14646 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC28.56■■■□□ 2.16
CHD1O14646 STK25P1-201ENST00000585406 838 ntBASIC28.56■■■□□ 2.16
CHD1O14646 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CHD1O14646 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms