Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.33■□□□□ 0.36
UBFD1O14562 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBFD1O14562 AC024563.2-201ENST00000603282 481 ntBASIC17.33■□□□□ 0.36
UBFD1O14562 LINC01451-201ENST00000623792 534 ntBASIC17.33■□□□□ 0.36
UBFD1O14562 AL023973.1-201ENST00000624619 620 ntBASIC17.33■□□□□ 0.36
UBFD1O14562 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.33■□□□□ 0.36
UBFD1O14562 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBFD1O14562 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBFD1O14562 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBFD1O14562 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBFD1O14562 AC084018.2-201ENST00000613093 2607 ntBASIC17.33■□□□□ 0.36
UBFD1O14562 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBFD1O14562 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
UBFD1O14562 KRT89P-201ENST00000620027 1478 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
UBFD1O14562 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 KRT18P22-201ENST00000402024 1347 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.32■□□□□ 0.36
UBFD1O14562 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 RASA4DP-201ENST00000460726 1199 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 AC116407.2-201ENST00000613639 860 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 AL391807.1-203ENST00000604392 2365 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBFD1O14562 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.32■□□□□ 0.36
UBFD1O14562 NKILA-202ENST00000614771 2598 ntBASIC17.32■□□□□ 0.36
UBFD1O14562 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 AC011676.5-201ENST00000624864 2660 ntBASIC17.31■□□□□ 0.36
UBFD1O14562 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBFD1O14562 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBFD1O14562 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.31■□□□□ 0.36
UBFD1O14562 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBFD1O14562 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBFD1O14562 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
UBFD1O14562 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
UBFD1O14562 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.3■□□□□ 0.36
UBFD1O14562 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
UBFD1O14562 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 DDX43P3-201ENST00000441064 443 ntBASIC17.3■□□□□ 0.36
UBFD1O14562 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBFD1O14562 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.3■□□□□ 0.36
UBFD1O14562 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
UBFD1O14562 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBFD1O14562 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms