Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 AC108860.2-201ENST00000562760 2183 ntBASIC14.4□□□□□ -0.1
SRRM4A7MD48 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRRM4A7MD48 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SRRM4A7MD48 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 AC106820.2-201ENST00000563775 3264 ntBASIC14.39□□□□□ -0.11
SRRM4A7MD48 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 RNF152P1-201ENST00000397754 604 ntBASIC14.39□□□□□ -0.11
SRRM4A7MD48 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 AC006011.2-201ENST00000621313 1158 ntBASIC14.39□□□□□ -0.11
SRRM4A7MD48 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.39□□□□□ -0.11
SRRM4A7MD48 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRRM4A7MD48 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 KRT8P47-201ENST00000604727 1398 ntBASIC14.38□□□□□ -0.11
SRRM4A7MD48 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 FAM8A6P-201ENST00000407496 1135 ntBASIC14.38□□□□□ -0.11
SRRM4A7MD48 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.38□□□□□ -0.11
SRRM4A7MD48 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRRM4A7MD48 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SRRM4A7MD48 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRRM4A7MD48 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms