Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC008687.5-201ENST00000593746 558 ntBASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 LINC00167-201ENST00000530583 1419 ntBASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPSF4LA6NMK7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AP000523.1-201ENST00000398242 1049 ntBASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AL596275.1-201ENST00000423464 877 ntBASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPSF4LA6NMK7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 KRT18P22-201ENST00000402024 1347 ntBASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC022898.2-201ENST00000616822 1312 ntBASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC108860.2-201ENST00000562760 2183 ntBASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPSF4LA6NMK7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 AC093827.2-201ENST00000512654 315 ntBASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 AC141257.4-201ENST00000634557 245 ntBASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 AC136944.6-201ENST00000634818 245 ntBASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPSF4LA6NMK7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms