Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDYE4A6NLX3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 PRSS44-201ENST00000515154 1146 ntBASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 AC135178.5-201ENST00000602597 674 ntBASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 KRT8P41-201ENST00000533985 1514 ntBASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDYE4A6NLX3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 KRT18P38-201ENST00000449496 1282 ntBASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SPDYE4A6NLX3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
SPDYE4A6NLX3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AC117500.1-201ENST00000497352 755 ntBASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms