Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 Z83836.1-201ENST00000624605 1642 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 FAM210CP-201ENST00000445714 574 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 AL049597.2-201ENST00000565575 961 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 AL390719.2-201ENST00000606993 987 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 AC009154.2-201ENST00000621177 724 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 KRT8P47-201ENST00000604727 1398 ntBASIC20.29■□□□□ 0.84
VWA3AA6NCI4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.29■□□□□ 0.84
VWA3AA6NCI4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
VWA3AA6NCI4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 AC009949.1-201ENST00000623048 1830 ntBASIC20.27■□□□□ 0.84
VWA3AA6NCI4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 AL645929.1-201ENST00000420084 975 ntBASIC20.27■□□□□ 0.84
VWA3AA6NCI4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VWA3AA6NCI4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.27■□□□□ 0.83
VWA3AA6NCI4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VWA3AA6NCI4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
VWA3AA6NCI4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VWA3AA6NCI4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VWA3AA6NCI4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms