Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 MIR4497-201ENST00000583208 89 ntBASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC009154.2-201ENST00000621177 724 ntBASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 AL138966.2-201ENST00000621997 464 ntBASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 AC116353.5-201ENST00000638148 1699 ntBASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV5-3A0A0A0MS03 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRBV5-3A0A0A0MS03 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AL118508.1-201ENST00000613502 2345 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC141257.4-201ENST00000634557 245 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC136944.6-201ENST00000634818 245 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AGGF1P2-201ENST00000426656 2106 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 BX276092.7-203ENST00000637198 1536 ntBASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV5-3A0A0A0MS03 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AL391807.1-203ENST00000604392 2365 ntBASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC004263.2-201ENST00000617183 678 ntBASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC106886.4-201ENST00000623557 2502 ntBASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 LINC01311-201ENST00000565162 1445 ntBASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 AC060834.1-201ENST00000443027 2032 ntBASIC16.69■□□□□ 0.26
TRBV5-3A0A0A0MS03 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-3A0A0A0MS03 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms