Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 GAPDHP21-201ENST00000450301 1010 ntBASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AC006116.8-202ENST00000587620 1550 ntBASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 AC005332.7-201ENST00000614046 2005 ntBASIC21.66■■□□□ 1.06
ARFGEF1Q9Y6D6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 HLA-V-201ENST00000429037 534 ntBASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 AP001059.3-201ENST00000619053 235 ntBASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ARFGEF1Q9Y6D6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ARFGEF1Q9Y6D6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 AC099522.2-201ENST00000607001 744 ntBASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.64■■□□□ 1.05
ARFGEF1Q9Y6D6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 AL121761.2-201ENST00000598007 1648 ntBASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 RNA5SP421-201ENST00000516864 134 ntBASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 SIRPAP1-201ENST00000448467 1770 ntBASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 AL499627.1-201ENST00000569373 2188 ntBASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ARFGEF1Q9Y6D6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARFGEF1Q9Y6D6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms