Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 RNA5SP421-201ENST00000516864 134 ntBASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC022145.2-201ENST00000598203 171 ntBASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCH2Q9Y6C5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AC005332.7-201ENST00000614046 2005 ntBASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AC005225.4-201ENST00000557330 545 ntBASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTCH2Q9Y6C5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC103564.2-201ENST00000432853 1299 ntBASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC007274.1-201ENST00000439805 662 ntBASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 DUX4L27-201ENST00000554796 1261 ntBASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 OR7E47P-204ENST00000575924 449 ntBASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 AL805961.1-202ENST00000641562 540 ntBASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PTCH2Q9Y6C5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTCH2Q9Y6C5 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms