Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CTDP1Q9Y5B0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CTDP1Q9Y5B0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 AC073592.3-201ENST00000625118 1834 ntBASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 CROCCP3-202ENST00000420820 1947 ntBASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 AL356309.3-201ENST00000624132 1934 ntBASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 PHGDH-209ENST00000641074 1780 ntBASIC20.62■□□□□ 0.89
CTDP1Q9Y5B0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 AF228730.7-201ENST00000641842 219 ntBASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CTDP1Q9Y5B0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 AC007967.3-201ENST00000434308 558 ntBASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 AC018712.1-201ENST00000455767 687 ntBASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CTDP1Q9Y5B0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms