Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 MIR661-201ENST00000384842 89 ntBASIC20.08■□□□□ 0.81
TRIM17Q9Y577 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.08■□□□□ 0.81
TRIM17Q9Y577 AC055876.3-201ENST00000431496 288 ntBASIC20.08■□□□□ 0.81
TRIM17Q9Y577 DDX43P3-201ENST00000441064 443 ntBASIC20.08■□□□□ 0.81
TRIM17Q9Y577 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.08■□□□□ 0.81
TRIM17Q9Y577 AC138649.4-201ENST00000612222 287 ntBASIC20.08■□□□□ 0.81
TRIM17Q9Y577 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRIM17Q9Y577 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 SIGLEC30P-201ENST00000455569 941 ntBASIC20.07■□□□□ 0.8
TRIM17Q9Y577 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 MEIS3P1-201ENST00000495167 958 ntBASIC20.07■□□□□ 0.8
TRIM17Q9Y577 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 AC009093.7-201ENST00000623853 1223 ntBASIC20.07■□□□□ 0.8
TRIM17Q9Y577 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRIM17Q9Y577 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 LINC01006-201ENST00000333319 2292 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 SIRPAP1-201ENST00000448467 1770 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 PTCHD3P3-201ENST00000403073 906 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AL627223.1-201ENST00000416693 442 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 GGTLC5P-201ENST00000617623 998 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 AC132938.5-201ENST00000624980 1813 ntBASIC20.06■□□□□ 0.8
TRIM17Q9Y577 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM17Q9Y577 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 OR8S1-201ENST00000310194 1080 ntBASIC20.05■□□□□ 0.8
TRIM17Q9Y577 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 TIMM8BP1-201ENST00000452384 211 ntBASIC20.05■□□□□ 0.8
TRIM17Q9Y577 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM17Q9Y577 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms