Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 AP000344.2-201ENST00000512987 629 ntBASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 DUTP2-201ENST00000519164 463 ntBASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTCBQ9Y3I0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 AL035633.1-201ENST00000406139 838 ntBASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 FAM58CP-201ENST00000435741 640 ntBASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 ACTG1P14-201ENST00000446382 1122 ntBASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 SPCS2P1-201ENST00000561636 679 ntBASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RTCBQ9Y3I0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
RTCBQ9Y3I0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
RTCBQ9Y3I0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 AL139400.1-201ENST00000366220 510 ntBASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 RHOQP3-201ENST00000437982 621 ntBASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 PHGDH-209ENST00000641074 1780 ntBASIC22.38■■□□□ 1.17
RTCBQ9Y3I0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 PTCHD3P3-201ENST00000403073 906 ntBASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC22.37■■□□□ 1.17
RTCBQ9Y3I0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms