Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
UBE2D4Q9Y2X8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 CRYGFP-201ENST00000418459 633 ntBASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 CR769767.2-201ENST00000622735 460 ntBASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
UBE2D4Q9Y2X8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
UBE2D4Q9Y2X8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.45□□□□□ -0.42
UBE2D4Q9Y2X8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms