Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 KRT89P-201ENST00000620027 1478 ntBASIC16.9■□□□□ 0.3
LHX6Q9UPM6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 NEFHP1-201ENST00000412845 2629 ntBASIC16.9■□□□□ 0.3
LHX6Q9UPM6 AC018445.3-201ENST00000624177 1945 ntBASIC16.9■□□□□ 0.3
LHX6Q9UPM6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LHX6Q9UPM6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX6Q9UPM6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.89■□□□□ 0.3
LHX6Q9UPM6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 ABCD1P5-201ENST00000445663 754 ntBASIC16.89■□□□□ 0.29
LHX6Q9UPM6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC005498.2-205ENST00000593218 784 ntBASIC16.89■□□□□ 0.29
LHX6Q9UPM6 MTDHP4-201ENST00000600287 670 ntBASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AL359881.2-201ENST00000602973 570 ntBASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AL139288.1-201ENST00000623748 933 ntBASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LHX6Q9UPM6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.88■□□□□ 0.29
LHX6Q9UPM6 GAPDHP21-201ENST00000450301 1010 ntBASIC16.88■□□□□ 0.29
LHX6Q9UPM6 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 AC004408.2-201ENST00000623613 2777 ntBASIC16.88■□□□□ 0.29
LHX6Q9UPM6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LHX6Q9UPM6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 KRT8P32-201ENST00000512863 1461 ntBASIC16.87■□□□□ 0.29
LHX6Q9UPM6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LHX6Q9UPM6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms