Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF3C4Q9UKN8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GTF3C4Q9UKN8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.25■□□□□ 0.67
GTF3C4Q9UKN8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF3C4Q9UKN8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GTF3C4Q9UKN8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 LINC00896-202ENST00000609602 2128 ntBASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 TSPY12P-201ENST00000421279 868 ntBASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 KRT18P55-202ENST00000578578 1546 ntBASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.24■□□□□ 0.67
GTF3C4Q9UKN8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 AL845331.1-201ENST00000424978 1190 ntBASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 AL450487.1-201ENST00000426799 995 ntBASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 AC091607.1-201ENST00000490318 1060 ntBASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 AC012615.1-201ENST00000565797 1299 ntBASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 LINC00167-201ENST00000530583 1419 ntBASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GTF3C4Q9UKN8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AC074051.2-201ENST00000565115 352 ntBASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AC011840.4-201ENST00000578471 627 ntBASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AP005901.3-202ENST00000581653 237 ntBASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF3C4Q9UKN8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms