Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 AC120498.8-201ENST00000614275 531 ntBASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 AC104581.4-201ENST00000623126 3052 ntBASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
CHCHD3Q9NX63 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 FLJ13224-201ENST00000313737 1514 ntBASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 KRT8P45-201ENST00000414328 1447 ntBASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHCHD3Q9NX63 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 AL121761.2-201ENST00000598007 1648 ntBASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 KRT8P32-201ENST00000512863 1461 ntBASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.65■□□□□ 0.26
CHCHD3Q9NX63 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHCHD3Q9NX63 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms