Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIN7CQ9NUP9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 TERF1P1-201ENST00000311003 1181 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 KRT18P23-201ENST00000435622 1283 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 CR769767.2-201ENST00000622735 460 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 FER1L4-210ENST00000615531 5998 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 AL645608.8-201ENST00000606034 2086 ntBASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIN7CQ9NUP9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 AC139713.2-201ENST00000641328 2723 ntBASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 AC099343.3-201ENST00000605834 2503 ntBASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 AL023806.1-201ENST00000603994 1649 ntBASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LIN7CQ9NUP9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 AC005521.1-201ENST00000393351 872 ntBASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 AC010203.1-204ENST00000548782 407 ntBASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 NEK4P2-201ENST00000580004 1012 ntBASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIN7CQ9NUP9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms