Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 PP12613-201ENST00000424958 2230 ntBASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BLOC1S4Q9NUP1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AP002414.4-201ENST00000589764 1148 ntBASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BLOC1S4Q9NUP1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 AC133963.1-201ENST00000504166 1679 ntBASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 AC246785.2-201ENST00000432512 513 ntBASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 DRAXINP1-201ENST00000437611 948 ntBASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.84■□□□□ 0.77
BLOC1S4Q9NUP1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 KRT18P1-202ENST00000452408 1331 ntBASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 AC011840.4-201ENST00000578471 627 ntBASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 AC091076.1-201ENST00000610741 619 ntBASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
BLOC1S4Q9NUP1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 AC233702.3-201ENST00000578656 1387 ntBASIC19.83■□□□□ 0.76
BLOC1S4Q9NUP1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
BLOC1S4Q9NUP1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms