Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.74■□□□□ 0.43
SSU72Q9NP77 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SSU72Q9NP77 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SSU72Q9NP77 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 AC128676.1-201ENST00000454392 318 ntBASIC17.73■□□□□ 0.43
SSU72Q9NP77 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 KRT18P6-201ENST00000555540 1265 ntBASIC17.73■□□□□ 0.43
SSU72Q9NP77 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
SSU72Q9NP77 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SSU72Q9NP77 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.72■□□□□ 0.43
SSU72Q9NP77 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 PCDHA14-201ENST00000506751 2298 ntBASIC17.72■□□□□ 0.43
SSU72Q9NP77 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 AL355355.2-201ENST00000442321 338 ntBASIC17.72■□□□□ 0.43
SSU72Q9NP77 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.72■□□□□ 0.43
SSU72Q9NP77 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SSU72Q9NP77 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SSU72Q9NP77 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 AC005104.2-201ENST00000427818 678 ntBASIC17.71■□□□□ 0.43
SSU72Q9NP77 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 AC113404.2-201ENST00000507884 177 ntBASIC17.71■□□□□ 0.43
SSU72Q9NP77 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.71■□□□□ 0.43
SSU72Q9NP77 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SSU72Q9NP77 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms