Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UPF2Q9HAU5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 AL024508.2-201ENST00000607749 1894 ntBASIC21.96■■□□□ 1.11
UPF2Q9HAU5 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UPF2Q9HAU5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.95■■□□□ 1.11
UPF2Q9HAU5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 FAM197Y1-201ENST00000421178 764 ntBASIC21.95■■□□□ 1.1
UPF2Q9HAU5 MIR4674-201ENST00000582457 87 ntBASIC21.95■■□□□ 1.1
UPF2Q9HAU5 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
UPF2Q9HAU5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 AC097488.1-201ENST00000507834 756 ntBASIC21.94■■□□□ 1.1
UPF2Q9HAU5 AC090192.1-201ENST00000517740 490 ntBASIC21.94■■□□□ 1.1
UPF2Q9HAU5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 AC022898.2-201ENST00000616822 1312 ntBASIC21.94■■□□□ 1.1
UPF2Q9HAU5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC21.94■■□□□ 1.1
UPF2Q9HAU5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
UPF2Q9HAU5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms