Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
POLR1BQ9H9Y6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
POLR1BQ9H9Y6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
POLR1BQ9H9Y6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
POLR1BQ9H9Y6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
POLR1BQ9H9Y6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 GPR32P1-201ENST00000601788 811 ntBASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 AC120114.3-201ENST00000611923 658 ntBASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 BX640515.1-201ENST00000617215 977 ntBASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 HLA-A-201ENST00000376802 1334 ntBASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 AL512353.2-201ENST00000448759 1962 ntBASIC17.7■□□□□ 0.42
POLR1BQ9H9Y6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 RCC2P3-201ENST00000418112 1537 ntBASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
POLR1BQ9H9Y6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
POLR1BQ9H9Y6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms