Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 LINC01451-201ENST00000623792 534 ntBASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TUBB1Q9H4B7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 AP000523.1-201ENST00000398242 1049 ntBASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 KRT18P65-201ENST00000439811 1286 ntBASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 AC024563.2-201ENST00000603282 481 ntBASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.22■□□□□ 0.35
TUBB1Q9H4B7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 KRT89P-201ENST00000620027 1478 ntBASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 AC084018.2-201ENST00000613093 2607 ntBASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TUBB1Q9H4B7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.21■□□□□ 0.34
TUBB1Q9H4B7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TUBB1Q9H4B7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
TUBB1Q9H4B7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TUBB1Q9H4B7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TUBB1Q9H4B7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TUBB1Q9H4B7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB1Q9H4B7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TUBB1Q9H4B7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
TUBB1Q9H4B7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms