Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 AC009237.14-201ENST00000609975 1594 ntBASIC16.98■□□□□ 0.31
CNTNAP3Q9BZ76 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 U91328.1-201ENST00000437528 223 ntBASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 AC022145.2-201ENST00000598203 171 ntBASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 AC004877.2-201ENST00000623941 599 ntBASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 AC098818.2-201ENST00000564925 2320 ntBASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 HCG11-201ENST00000411553 5696 ntBASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
CNTNAP3Q9BZ76 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 RPS2P32-201ENST00000439199 892 ntBASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 AC068472.1-201ENST00000474589 881 ntBASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 AC091812.2-201ENST00000619081 385 ntBASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 AC116562.4-201ENST00000641316 2276 ntBASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNTNAP3Q9BZ76 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNTNAP3Q9BZ76 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AC104417.2-201ENST00000562989 1793 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNTNAP3Q9BZ76 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms