Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HDHD3Q9BSH5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HDHD3Q9BSH5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 LINC00167-201ENST00000530583 1419 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AC011676.5-201ENST00000624864 2660 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AC009947.2-201ENST00000444014 672 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AC008550.1-201ENST00000511500 884 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 C2orf69P3-201ENST00000565542 1120 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 MIR4785-201ENST00000585005 73 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AL138688.1-201ENST00000624851 1594 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 LINC00304-203ENST00000565008 1864 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 NKILA-202ENST00000614771 2598 ntBASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HDHD3Q9BSH5 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HDHD3Q9BSH5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
HDHD3Q9BSH5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms