Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 MIR718-201ENST00000390190 70 ntBASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 NEK4P2-201ENST00000580004 1012 ntBASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.81■□□□□ 0.28
CPPED1Q9BRF8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CYP2D8P-201ENST00000433633 1490 ntBASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 KRT8P9-201ENST00000558927 1449 ntBASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 FAM87A-204ENST00000613235 858 ntBASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CPPED1Q9BRF8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 AC128688.1-201ENST00000487626 519 ntBASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 AC010947.1-201ENST00000623454 693 ntBASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CPPED1Q9BRF8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CPPED1Q9BRF8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms