Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 AL031432.5-201ENST00000641059 760 ntBASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 LINC00602-201ENST00000629776 2065 ntBASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 GPAT2P1-201ENST00000444924 1672 ntBASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBA1CQ9BQE3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 KRT8P3-201ENST00000519669 1449 ntBASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 AC092647.4-201ENST00000457211 535 ntBASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 AL441883.1-201ENST00000566170 1045 ntBASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 CR769767.2-201ENST00000622735 460 ntBASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBA1CQ9BQE3 AL499627.1-201ENST00000569373 2188 ntBASIC16.89■□□□□ 0.3
TUBA1CQ9BQE3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBA1CQ9BQE3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBA1CQ9BQE3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 AL023284.2-201ENST00000405850 579 ntBASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 FAM8A6P-201ENST00000407496 1135 ntBASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBA1CQ9BQE3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TUBA1CQ9BQE3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms