Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 KRT18P23-201ENST00000435622 1283 ntBASIC16.62■□□□□ 0.25
TM9SF2Q99805 SEC1P-202ENST00000473944 940 ntBASIC16.62■□□□□ 0.25
TM9SF2Q99805 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 AC083849.1-201ENST00000615227 514 ntBASIC16.62■□□□□ 0.25
TM9SF2Q99805 HYMAI.1-201ENST00000620949 238 ntBASIC16.62■□□□□ 0.25
TM9SF2Q99805 AC116407.4-201ENST00000623319 1061 ntBASIC16.62■□□□□ 0.25
TM9SF2Q99805 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF2Q99805 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM9SF2Q99805 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 HBZP1-201ENST00000354915 429 ntBASIC16.61■□□□□ 0.25
TM9SF2Q99805 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 MIR564-202ENST00000385049 94 ntBASIC16.61■□□□□ 0.25
TM9SF2Q99805 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 HEIH-201ENST00000623091 1652 ntBASIC16.61■□□□□ 0.25
TM9SF2Q99805 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.61■□□□□ 0.25
TM9SF2Q99805 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TM9SF2Q99805 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 PCDHA12-202ENST00000613593 2588 ntBASIC16.61■□□□□ 0.25
TM9SF2Q99805 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF2Q99805 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF2Q99805 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TM9SF2Q99805 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 AC034236.2-201ENST00000606662 1610 ntBASIC16.59■□□□□ 0.25
TM9SF2Q99805 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TM9SF2Q99805 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.59■□□□□ 0.25
TM9SF2Q99805 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms