Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC005225.4-201ENST00000557330 545 ntBASIC23.59■■□□□ 1.37
ABCA3Q99758 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC23.59■■□□□ 1.37
ABCA3Q99758 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ABCA3Q99758 FALEC-201ENST00000416894 566 ntTSL 3 BASIC23.59■■□□□ 1.37
ABCA3Q99758 AC015922.1-201ENST00000421102 1152 ntBASIC23.59■■□□□ 1.37
ABCA3Q99758 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 ACTL9-202ENST00000612068 1252 ntBASIC23.59■■□□□ 1.37
ABCA3Q99758 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.59■■□□□ 1.37
ABCA3Q99758 AL590787.1-201ENST00000568856 1315 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
ABCA3Q99758 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.58■■□□□ 1.37
ABCA3Q99758 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.58■■□□□ 1.37
ABCA3Q99758 AC005034.1-201ENST00000426657 489 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.58■■□□□ 1.37
ABCA3Q99758 AC002472.2-201ENST00000442739 958 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 TIMM8BP1-201ENST00000452384 211 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 UGT1A2P-201ENST00000454886 866 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 AC087163.2-201ENST00000457299 853 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 KRT8P48-201ENST00000515599 1220 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 AC190387.1-201ENST00000551683 408 ntBASIC23.58■■□□□ 1.37
ABCA3Q99758 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ABCA3Q99758 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
ABCA3Q99758 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 AC100803.2-201ENST00000562459 1963 ntBASIC23.57■■□□□ 1.36
ABCA3Q99758 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC23.57■■□□□ 1.36
ABCA3Q99758 GPS2P2-201ENST00000430745 888 ntBASIC23.57■■□□□ 1.36
ABCA3Q99758 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC23.57■■□□□ 1.36
ABCA3Q99758 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.57■■□□□ 1.36
ABCA3Q99758 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.57■■□□□ 1.36
ABCA3Q99758 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.57■■□□□ 1.36
ABCA3Q99758 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 PHGDH-209ENST00000641074 1780 ntBASIC23.57■■□□□ 1.36
ABCA3Q99758 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ABCA3Q99758 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.57■■□□□ 1.36
ABCA3Q99758 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC23.56■■□□□ 1.36
ABCA3Q99758 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.56■■□□□ 1.36
ABCA3Q99758 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.56■■□□□ 1.36
ABCA3Q99758 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.56■■□□□ 1.36
ABCA3Q99758 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.56■■□□□ 1.36
ABCA3Q99758 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
ABCA3Q99758 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
ABCA3Q99758 AL121761.2-201ENST00000598007 1648 ntBASIC23.56■■□□□ 1.36
ABCA3Q99758 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.56■■□□□ 1.36
ABCA3Q99758 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
ABCA3Q99758 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC23.56■■□□□ 1.36
ABCA3Q99758 AC112191.1-201ENST00000523689 701 ntBASIC23.56■■□□□ 1.36
ABCA3Q99758 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ABCA3Q99758 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
ABCA3Q99758 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC23.55■■□□□ 1.36
ABCA3Q99758 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms