Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
TRGV9Q99603 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
TRGV9Q99603 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRGV9Q99603 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 AP001094.4-201ENST00000579008 2176 ntBASIC13.95□□□□□ -0.18
TRGV9Q99603 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AL121761.2-201ENST00000598007 1648 ntBASIC13.95□□□□□ -0.18
TRGV9Q99603 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AP000523.1-201ENST00000398242 1049 ntBASIC13.95□□□□□ -0.18
TRGV9Q99603 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRGV9Q99603 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 DDX43P3-201ENST00000441064 443 ntBASIC13.95□□□□□ -0.18
TRGV9Q99603 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.95□□□□□ -0.18
TRGV9Q99603 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
TRGV9Q99603 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRGV9Q99603 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRGV9Q99603 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRGV9Q99603 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.95□□□□□ -0.18
TRGV9Q99603 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 CROCCP2-202ENST00000412962 2773 ntBASIC13.94□□□□□ -0.18
TRGV9Q99603 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC13.94□□□□□ -0.18
TRGV9Q99603 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
TRGV9Q99603 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.94□□□□□ -0.18
TRGV9Q99603 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.94□□□□□ -0.18
TRGV9Q99603 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRGV9Q99603 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms