Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.42□□□□□ -0.26
LINC00477Q96M19 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 AC133963.1-201ENST00000504166 1679 ntBASIC13.42□□□□□ -0.26
LINC00477Q96M19 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 HARS-201ENST00000307633 1780 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 AL023806.1-201ENST00000603994 1649 ntBASIC13.42□□□□□ -0.26
LINC00477Q96M19 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LINC00477Q96M19 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
LINC00477Q96M19 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 AL138688.1-201ENST00000624851 1594 ntBASIC13.41□□□□□ -0.26
LINC00477Q96M19 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 AC132938.6-201ENST00000623828 1655 ntBASIC13.41□□□□□ -0.26
LINC00477Q96M19 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 MMP23A-201ENST00000234610 1017 ntBASIC13.41□□□□□ -0.26
LINC00477Q96M19 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 SNORA78-201ENST00000459373 127 ntBASIC13.41□□□□□ -0.26
LINC00477Q96M19 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LINC00477Q96M19 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.41□□□□□ -0.26
LINC00477Q96M19 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LINC00477Q96M19 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LINC00477Q96M19 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms