Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 AC005104.2-201ENST00000427818 678 ntBASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 AL136038.3-201ENST00000561909 1096 ntBASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM5Q96HC4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM5Q96HC4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM5Q96HC4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AL353801.3-201ENST00000609898 542 ntBASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM5Q96HC4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 AL645929.1-201ENST00000420084 975 ntBASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 RN7SL606P-201ENST00000472779 293 ntBASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM5Q96HC4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 AL645608.8-201ENST00000606034 2086 ntBASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM5Q96HC4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms