Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HPS1Q92902 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
HPS1Q92902 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 DOC2GP-204ENST00000639052 2548 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 TMPOP1-202ENST00000424642 1267 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.39■□□□□ 0.21
HPS1Q92902 SLC25A6P5-201ENST00000435663 894 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.39■□□□□ 0.21
HPS1Q92902 FITM1-202ENST00000559294 800 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 AP000525.1-201ENST00000608286 694 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 AC005363.2-201ENST00000618631 242 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.39■□□□□ 0.21
HPS1Q92902 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 PKD1P5-201ENST00000532415 10291 ntBASIC16.39■□□□□ 0.21
HPS1Q92902 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
HPS1Q92902 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HPS1Q92902 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.38■□□□□ 0.21
HPS1Q92902 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HPS1Q92902 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 MIR1238-201ENST00000408483 83 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS1Q92902 NAPSB-206ENST00000562112 1266 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS1Q92902 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS1Q92902 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS1Q92902 AL445675.2-201ENST00000620291 557 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 AC092865.7-201ENST00000641832 219 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HPS1Q92902 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 TSPY26P-202ENST00000565928 3884 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.38■□□□□ 0.21
HPS1Q92902 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
HPS1Q92902 IRX1P1-201ENST00000438849 1838 ntBASIC16.38■□□□□ 0.21
HPS1Q92902 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HPS1Q92902 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS1Q92902 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 FSCN1P1-201ENST00000568912 1481 ntBASIC16.37■□□□□ 0.21
HPS1Q92902 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HPS1Q92902 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS1Q92902 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS1Q92902 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms