Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHD5Q8TDI0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 AC007613.1-201ENST00000572811 2597 ntBASIC18.01■□□□□ 0.47
CHD5Q8TDI0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 AC018712.1-201ENST00000455767 687 ntBASIC18.01■□□□□ 0.47
CHD5Q8TDI0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 AC120498.9-201ENST00000339021 3867 ntBASIC18.01■□□□□ 0.47
CHD5Q8TDI0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD5Q8TDI0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18■□□□□ 0.47
CHD5Q8TDI0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18■□□□□ 0.47
CHD5Q8TDI0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
CHD5Q8TDI0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18■□□□□ 0.47
CHD5Q8TDI0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 AL355312.1-201ENST00000407115 2176 ntBASIC18■□□□□ 0.47
CHD5Q8TDI0 TPM4P1-201ENST00000436100 807 ntBASIC18■□□□□ 0.47
CHD5Q8TDI0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18■□□□□ 0.47
CHD5Q8TDI0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 AL691432.3-201ENST00000621860 400 ntBASIC18■□□□□ 0.47
CHD5Q8TDI0 AL139288.1-201ENST00000623748 933 ntBASIC18■□□□□ 0.47
CHD5Q8TDI0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18■□□□□ 0.47
CHD5Q8TDI0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CHD5Q8TDI0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CHD5Q8TDI0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 AC012317.2-201ENST00000623305 2251 ntBASIC17.99■□□□□ 0.47
CHD5Q8TDI0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 RNA5SP419-201ENST00000515908 135 ntBASIC17.99■□□□□ 0.47
CHD5Q8TDI0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 LINC01451-201ENST00000623792 534 ntBASIC17.99■□□□□ 0.47
CHD5Q8TDI0 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 AC104692.2-201ENST00000603054 253 ntBASIC17.99■□□□□ 0.47
CHD5Q8TDI0 AL121772.3-201ENST00000610840 674 ntBASIC17.99■□□□□ 0.47
CHD5Q8TDI0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD5Q8TDI0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.98■□□□□ 0.47
CHD5Q8TDI0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 RBM17P3-201ENST00000417687 1192 ntBASIC17.98■□□□□ 0.47
CHD5Q8TDI0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 SART3-203ENST00000546611 1184 ntBASIC17.98■□□□□ 0.47
CHD5Q8TDI0 AL591684.3-201ENST00000605187 298 ntBASIC17.98■□□□□ 0.47
CHD5Q8TDI0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
CHD5Q8TDI0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms