Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 AC004263.2-201ENST00000617183 678 ntBASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 AL358472.4-201ENST00000633140 710 ntBASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 Z83836.1-201ENST00000624605 1642 ntBASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HMGCLL1Q8TB92 AL353692.3-201ENST00000407031 1396 ntBASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 KRT8P26-201ENST00000534154 1276 ntBASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HMGCLL1Q8TB92 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 DUTP2-201ENST00000519164 463 ntBASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HMGCLL1Q8TB92 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HMGCLL1Q8TB92 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 TSPY22P-201ENST00000427496 604 ntBASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 KRT18P65-201ENST00000439811 1286 ntBASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HMGCLL1Q8TB92 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.5■□□□□ 0.39
HMGCLL1Q8TB92 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms