Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC116407.2-201ENST00000613639 860 ntBASIC16.76■□□□□ 0.27
NUP43Q8NFH3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
NUP43Q8NFH3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 LINC01238-205ENST00000567549 1107 ntBASIC16.75■□□□□ 0.27
NUP43Q8NFH3 GPR32P1-201ENST00000601788 811 ntBASIC16.75■□□□□ 0.27
NUP43Q8NFH3 AC009154.2-201ENST00000621177 724 ntBASIC16.75■□□□□ 0.27
NUP43Q8NFH3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
NUP43Q8NFH3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 AL353692.3-201ENST00000407031 1396 ntBASIC16.74■□□□□ 0.27
NUP43Q8NFH3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.74■□□□□ 0.27
NUP43Q8NFH3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AL671277.2-201ENST00000458060 996 ntBASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AC005332.3-201ENST00000589904 676 ntBASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AC083849.1-201ENST00000615227 514 ntBASIC16.73■□□□□ 0.27
NUP43Q8NFH3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.73■□□□□ 0.27
NUP43Q8NFH3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NUP43Q8NFH3 FZD10-202ENST00000539839 3282 ntBASIC16.73■□□□□ 0.27
NUP43Q8NFH3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms