Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 POM121L3P-201ENST00000419331 1163 ntBASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 AC116407.2-201ENST00000613639 860 ntBASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 AC006116.8-202ENST00000587620 1550 ntBASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01555Q8NAE3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 DDX43P3-201ENST00000441064 443 ntBASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 KRT18P31-201ENST00000506277 1292 ntBASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 INTS4P1-201ENST00000438455 1935 ntBASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LINC01555Q8NAE3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 AL133373.2-201ENST00000623187 2828 ntBASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LINC01555Q8NAE3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 COX5BP2-201ENST00000392354 334 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 KRT16P4-201ENST00000453883 522 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 UNC93B7-201ENST00000509439 705 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 MIR5100-201ENST00000579544 119 ntBASIC17.15■□□□□ 0.34
LINC01555Q8NAE3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms