Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SCML4Q8N228 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SCML4Q8N228 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.56■□□□□ 0.56
SCML4Q8N228 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SCML4Q8N228 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCML4Q8N228 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.55■□□□□ 0.56
SCML4Q8N228 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.55■□□□□ 0.56
SCML4Q8N228 AD001527.2-201ENST00000622994 785 ntBASIC18.55■□□□□ 0.56
SCML4Q8N228 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCML4Q8N228 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.55■□□□□ 0.56
SCML4Q8N228 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SCML4Q8N228 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SCML4Q8N228 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
SCML4Q8N228 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.54■□□□□ 0.56
SCML4Q8N228 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.54■□□□□ 0.56
SCML4Q8N228 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.54■□□□□ 0.56
SCML4Q8N228 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.54■□□□□ 0.56
SCML4Q8N228 AC002558.1-201ENST00000488906 803 ntBASIC18.54■□□□□ 0.56
SCML4Q8N228 UNC93B7-201ENST00000509439 705 ntBASIC18.54■□□□□ 0.56
SCML4Q8N228 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.54■□□□□ 0.56
SCML4Q8N228 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.54■□□□□ 0.56
SCML4Q8N228 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 LINC01711-201ENST00000598340 967 ntBASIC18.54■□□□□ 0.56
SCML4Q8N228 IFNL4P1-201ENST00000607083 540 ntBASIC18.54■□□□□ 0.56
SCML4Q8N228 REXO1L6P-202ENST00000619970 1078 ntBASIC18.54■□□□□ 0.56
SCML4Q8N228 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.54■□□□□ 0.56
SCML4Q8N228 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.54■□□□□ 0.56
SCML4Q8N228 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCML4Q8N228 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.54■□□□□ 0.56
SCML4Q8N228 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SCML4Q8N228 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 AL353593.2-201ENST00000602529 1483 ntBASIC18.53■□□□□ 0.56
SCML4Q8N228 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCML4Q8N228 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCML4Q8N228 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.53■□□□□ 0.56
SCML4Q8N228 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SCML4Q8N228 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms