Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 AC092329.2-201ENST00000598402 547 ntBASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCUBE3Q8IX30 AC067852.2-201ENST00000590513 2313 ntBASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 TOB2P1-201ENST00000469761 992 ntBASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 AC233702.3-201ENST00000578656 1387 ntBASIC18.8■□□□□ 0.6
SCUBE3Q8IX30 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 AC009949.1-201ENST00000623048 1830 ntBASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 SLC25A6P5-201ENST00000435663 894 ntBASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 LINC00265-3P-201ENST00000447588 903 ntBASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 AP005901.3-202ENST00000581653 237 ntBASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCUBE3Q8IX30 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.78■□□□□ 0.6
SCUBE3Q8IX30 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms