Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 AC117947.1-201ENST00000427448 529 ntBASIC16.55■□□□□ 0.24
VRK2Q86Y07 BX664615.1-201ENST00000443558 458 ntBASIC16.55■□□□□ 0.24
VRK2Q86Y07 KRT18P57-201ENST00000443599 1254 ntBASIC16.55■□□□□ 0.24
VRK2Q86Y07 AC092597.1-201ENST00000487352 616 ntBASIC16.55■□□□□ 0.24
VRK2Q86Y07 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.55■□□□□ 0.24
VRK2Q86Y07 AC141586.5-201ENST00000624546 2050 ntBASIC16.55■□□□□ 0.24
VRK2Q86Y07 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VRK2Q86Y07 KRT89P-201ENST00000620027 1478 ntBASIC16.54■□□□□ 0.24
VRK2Q86Y07 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 STARP1-201ENST00000397973 869 ntBASIC16.54■□□□□ 0.24
VRK2Q86Y07 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC004263.2-201ENST00000617183 678 ntBASIC16.54■□□□□ 0.24
VRK2Q86Y07 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC009949.1-201ENST00000623048 1830 ntBASIC16.54■□□□□ 0.24
VRK2Q86Y07 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.54■□□□□ 0.24
VRK2Q86Y07 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VRK2Q86Y07 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 HLA-F-220ENST00000434407 884 ntBASIC16.53■□□□□ 0.24
VRK2Q86Y07 KRT18P48-201ENST00000434763 852 ntBASIC16.53■□□□□ 0.24
VRK2Q86Y07 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VRK2Q86Y07 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.53■□□□□ 0.24
VRK2Q86Y07 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms