Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 AC092647.4-201ENST00000457211 535 ntBASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D4Q7Z3S7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D4Q7Z3S7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D4Q7Z3S7 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 AC009947.2-201ENST00000444014 672 ntBASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 AC006116.8-202ENST00000587620 1550 ntBASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D4Q7Z3S7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 TSPY5P-201ENST00000426936 936 ntBASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 KRT18P48-201ENST00000434763 852 ntBASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 AL121894.2-201ENST00000602977 491 ntBASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 AL138966.2-201ENST00000621997 464 ntBASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.63■□□□□ 0.73
CACNA2D4Q7Z3S7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.62■□□□□ 0.73
CACNA2D4Q7Z3S7 YBX1P2-201ENST00000489612 999 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms