Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 MIR943-201ENST00000401286 94 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC007967.3-201ENST00000434308 558 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC112698.1-201ENST00000510299 916 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC073592.5-201ENST00000624854 528 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC007064.4-201ENST00000637740 555 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 RHOQP3-201ENST00000437982 621 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 KRT18P65-201ENST00000439811 1286 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 ATP5G2P4-201ENST00000442175 420 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 CNN2P2-201ENST00000443536 909 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 CNN2P3-201ENST00000450201 906 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 AC023141.13-201ENST00000604991 943 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 AL136317.3-201ENST00000618497 906 ntBASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RSPO4Q2I0M5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 KRT18P41-201ENST00000518924 1277 ntBASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RSPO4Q2I0M5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RSPO4Q2I0M5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms