Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 STK19B-204ENST00000512515 211 ntBASIC31.17■■■□□ 2.58
HMGXB3Q12766 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 AC008761.3-201ENST00000624803 892 ntBASIC31.17■■■□□ 2.58
HMGXB3Q12766 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
HMGXB3Q12766 TFAMP1-201ENST00000412727 736 ntBASIC31.16■■■□□ 2.58
HMGXB3Q12766 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC31.16■■■□□ 2.58
HMGXB3Q12766 KLF2P3-201ENST00000451977 1087 ntBASIC31.16■■■□□ 2.58
HMGXB3Q12766 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC31.16■■■□□ 2.58
HMGXB3Q12766 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC31.16■■■□□ 2.58
HMGXB3Q12766 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC31.16■■■□□ 2.58
HMGXB3Q12766 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 NABP1-203ENST00000409510 843 ntTSL 5 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 CRB3P1-201ENST00000449338 276 ntBASIC31.15■■■□□ 2.58
HMGXB3Q12766 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 RN7SL589P-201ENST00000481268 310 ntBASIC31.15■■■□□ 2.58
HMGXB3Q12766 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC31.15■■■□□ 2.58
HMGXB3Q12766 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
HMGXB3Q12766 ANO7L1-203ENST00000602586 1720 ntBASIC31.15■■■□□ 2.58
HMGXB3Q12766 AC069335.1-201ENST00000489972 472 ntBASIC31.14■■■□□ 2.58
HMGXB3Q12766 GATB-205ENST00000508611 605 ntTSL 2 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 CECR7-204ENST00000609932 568 ntTSL 2 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
HMGXB3Q12766 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC31.14■■■□□ 2.58
HMGXB3Q12766 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
HMGXB3Q12766 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.57
HMGXB3Q12766 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC31.14■■■□□ 2.57
HMGXB3Q12766 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
HMGXB3Q12766 BASP1P1-201ENST00000430708 665 ntBASIC31.14■■■□□ 2.57
HMGXB3Q12766 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.57
HMGXB3Q12766 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
HMGXB3Q12766 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC31.14■■■□□ 2.57
HMGXB3Q12766 AL590787.1-201ENST00000568856 1315 ntBASIC31.13■■■□□ 2.57
HMGXB3Q12766 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 AC140658.5-201ENST00000438532 169 ntBASIC31.13■■■□□ 2.57
HMGXB3Q12766 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 INO80E-210ENST00000567705 880 ntTSL 3 BASIC31.13■■■□□ 2.57
HMGXB3Q12766 AC109462.3-201ENST00000573934 613 ntBASIC31.13■■■□□ 2.57
HMGXB3Q12766 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
HMGXB3Q12766 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 AC097637.2-201ENST00000624096 1997 ntBASIC31.12■■■□□ 2.57
HMGXB3Q12766 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC31.12■■■□□ 2.57
HMGXB3Q12766 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC31.12■■■□□ 2.57
HMGXB3Q12766 TSPY16P-201ENST00000449843 468 ntBASIC31.12■■■□□ 2.57
HMGXB3Q12766 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC31.12■■■□□ 2.57
HMGXB3Q12766 TSFM-210ENST00000550559 897 ntTSL 5 BASIC31.12■■■□□ 2.57
HMGXB3Q12766 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
HMGXB3Q12766 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC31.12■■■□□ 2.57
HMGXB3Q12766 TMED1-207ENST00000591695 809 ntTSL 5 BASIC31.12■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms